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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908524.1_cds_XP_016458644.1_52250
CDS Infomation

[gene=LOC107782290] [db_xref=GeneID:107782290] [protein=aspartic proteinase CDR1-like] [protein_id=XP_016458644.1] [location=complement(join(6526..7656,9812..9990,10519..10552))] [gbkey=CDS]
Sequence

ATGGATACAGGTGGTTCCACAACAAGAGACATTGTATGTTCCTCTGGTGTCATCGCACCG
GCGGAGGCTTTGGTCGCGGGTACAGACTTGCAGATGTATGAGGGTGCATCCCAGAAACGG
AGAAGGCTAGCCCAGGCCTGGATTCACTGGTGCAGACACCTAGGCGCAGATGCGCATCCG
CATGCACGAGTGCTATTTCACAGAAGTAGAACTAAAAGTTCCTTTGCTAGTGCTAATGAC
ACAATCCAATCTGATATTATTCCAATCCCAGGAGAATATCTTATGAAAATTTCTATTGGA
ACCCCACCAGTTGAAATTGTAGCCATAGCTGATACTGGTAGTGATTTAACATGGACACAA
TGTAAGCCTTGCACTAGTTGTTTCAAACAAACAGCCCCTATTTTTGATTCCAAAACAAGC
TCTACTTATAAAACCATAGGGTGTAACGCTGAGGAATGTGCATCACTAGGGACTTCTTCT
TGTGTTAGAGGAAATATTTGTGAATATCAAATGAGTTATGGTGACCAATCACAAACTATT
GGTGATCTTGCTTTTGAAAAATTCACATTTCCTTCTACTTCTGGAAATAATGTTTCTATT
CCTAATGTTGTGTTTGGTTGTGGTCATGACAATAGTGGCACATTCAATAACTATACTTCT
GGTATTATTGGCTTAGGTGGTGGTGAAGTCTCAATTGTCAACCAATTGGACAAACAAATC
AAAGGGAAATTCTCTTATTGTTTAATCCCAATTCCATTACAATCATCTATTTCCAATGCT
ACAAGTCATATCAACTTTGGCAATAGTGTCACTGTGTCTGGTCCTAATGTCGTTTCAACT
CCCTTGATAAAAAAGGAACCGTCCACGTTCTACTATCTAAATTTGGAAGGAATTAGCGTT
GGGAATAAGAGGGTAGAATTCAAATCTTTTAAAATTGCTTCTTCTAATGCTTTTGGTGGT
GATGAAGGTAACATTATAATTGATTCTGGTACGACGTTGACTTTTTTGCCTAATGATTTT
TACTTGAATTTGGAGTCGATATTGTTGGAATCGATCAATGCAACTAGAATTGATGATCCT
TCGGGCACTTTTGGTATCTGTTACGAGTCTAAGGATGGTACTATTGATGCTCCCAAAATT
GTCACGCATTTTACTGATGCTGATTTAGTGTTGGCGCCTTCGAGCACGTTTGCAGAAGTG
GAGGAAGGTTTGGTTTGTCTTACATTAGTGCCAGCAGAACAAATTGCTATTTTTGGAAAC
TTGGCACAGGCGAATTTCCTAATTGGATATGATCTTGTTGCTAACAAAGTTTCTTTCAAG
CCTACTGATTGCACTAAGTACTAA

Peptide Sequence

PEP ID

XP_016458644.1
PEP Infomation

PREDICTED: aspartic proteinase CDR1-like [Nicotiana tabacum]
Sequence

MDTGGSTTRDIVCSSGVIAPAEALVAGTDLQMYEGASQKRRRLAQAWIHWCRHLGADAHP
HARVLFHRSRTKSSFASANDTIQSDIIPIPGEYLMKISIGTPPVEIVAIADTGSDLTWTQ
CKPCTSCFKQTAPIFDSKTSSTYKTIGCNAEECASLGTSSCVRGNICEYQMSYGDQSQTI
GDLAFEKFTFPSTSGNNVSIPNVVFGCGHDNSGTFNNYTSGIIGLGGGEVSIVNQLDKQI
KGKFSYCLIPIPLQSSISNATSHINFGNSVTVSGPNVVSTPLIKKEPSTFYYLNLEGISV
GNKRVEFKSFKIASSNAFGGDEGNIIIDSGTTLTFLPNDFYLNLESILLESINATRIDDP
SGTFGICYESKDGTIDAPKIVTHFTDADLVLAPSSTFAEVEEGLVCLTLVPAEQIAIFGN
LAQANFLIGYDLVANKVSFKPTDCTKY

Transcript Sequence

Gene sequence data has not been registered.